Bioconductor Rna seq

Showing : rna seq • reset

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4.4k

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deseq2 mahattan plot RNA Seq

updated 5.4 years ago by bernatgel ▴ 150 • written 6.3 years ago by adeler001 • 0

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5.7k

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batch effect limma rna seq DE

updated 5.8 years ago by Steve Lianoglou ★ 13k • written 5.8 years ago by svlachavas ▴ 840

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1.6k

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RNA seq cpm

updated 5.9 years ago by Kevin Blighe ★ 4.0k • written 5.9 years ago by isabel.pieterse • 0

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1.6k

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sgseq alternative splicing rna seq

updated 19 months ago by Sara • 0 • written 6.2 years ago by 116100016 • 0

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1.4k

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edger RNA Seq

updated 6.2 years ago by James W. MacDonald 68k • written 6.3 years ago by abf ▴ 30

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862

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rna seq

6.3 years ago adeler001 • 0

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1.5k

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rna seq SGSeq Alternative splicing

updated 6.4 years ago by Leonard Goldstein ▴ 260 • written 6.4 years ago by 116100016 • 0

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887

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deseq2 likelihood ratio rna seq wald test

updated 6.4 years ago by Michael Love 43k • written 6.4 years ago by adeler001 • 0

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1.6k

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volcano plot rna seq

updated 6.5 years ago by Michael Love 43k • written 6.5 years ago by adeler001 • 0

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2.0k

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limma voom RNA Seq Time-course experiments

updated 6.7 years ago by Aaron Lun ★ 29k • written 6.7 years ago by mahes.muniandy • 0

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1.8k

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RNA seq wgcna

updated 6.7 years ago by Peter Langfelder ★ 3.0k • written 6.7 years ago by agustin.gonvi ▴ 20

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2.9k

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rna seq trimmomatic trimming adapter trimming paired analysis

6.8 years ago Mozart ▴ 30

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2.3k

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heatmap.2 hierarchical clustering microarray RNA seq DEG

8.0 years ago lawarde.ankita1 ▴ 30

13 results • Page 1 of 1

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Comment: Question on processing compound protein groups in limpa by JKim • 0

Many thanks. I appreciate your advice.

Answer: Question on processing compound protein groups in limpa by Gordon Smyth 53k

Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…

Answer: Correct usage of limpa for protein input by Gordon Smyth 53k

limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…

Comment: A problem occurs when running the monocle2 by a2a2hset32aa • 0

Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…

Comment: Deadline Extended: EuroBioC2026 Call for Abstracts by a2a2hset32aa • 0

Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…

Votes

Answer: Question on processing compound protein groups in limpa

Answer: Correct usage of limpa for protein input

A: Interpretaion of dendrogram height in WGCNA?

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Popular Question to Dario Strbenac ★ 1.6k

Popular Question to chirag.parsania ▴ 10